The Single-Cell World Podcast

Ep. 44: Scale Biosciences Innovating scDNA methylation and scRNAseq

In this podcast episode, I had the privilege of talking with Melanie Masuda, the Director of Market Development at Scale Biosciences. Melanie told me all about Scale Biosciences' cutting-edge technology and gave me a full overview of all of their different kits.
 
Listen now and understand how the single-cell (sc) sequencing DNA methylation, the scRNAseq, and the CRISPR enrichment kits work. Maybe this is the solution for your research project!
 
Useful Links:
Melanie Masuda LinkedIn
Scale Biosciences(website)
Twitter
LinkedIn
KITS
scDNA methylation
scRNA
CRISPR guide enrichment kit
Support our podcast: pay us a Ko-fi
 

Ep.43: The SMART-seq Family-full length RNA methods

In this insightful podcast episode, I have the privilege of interviewing Simone Picelli, the Head of the Single-Cell Genomics Platform at the Institute of Ophthalmology Basel. As we talked, we got into the specifics of single-cell RNA sequencing (scRNA-seq) full-length methods from the SMART-seq family.
Simone shared valuable insights into various methods within, including SMART-seq, SMART-seq 2, SMART-seq 3, FLASH-seq, FLASH-seq low-amplification, and FLASH-seq with UMI. We explored the unique features and applications of each method, highlighting their contributions to advancing single-cell genomics research. 
In addition, we also talked about other common methods and the bigger picture of single-cell sequencing technology, such as the problems it faces and its future.
Explore the fascinating world of SMART-seq methods with Simone Picelli - a must-listen episode. Tune in now and learn about the ideal way to study RNA isoforms. 

Ep. 42: Updating Episode 14, Single-Cell Methods-an overview

The Single-Cell World Podcast is now available in video as well, but just on Apple Podcast and in our new YouTube channel  😉
Episode 14: Single-Cell Methods, an overview, needed an update since there is a fourth method that is being used to individualize cells when using single-cell sequencing technology.
Join me and listen to it, as well as other updates concerning the methods that are at the core of the single-cell sequencing technology.
Here I leave you a gift, related with this episode.Thank you for listening.Kind Regards,Cátia

Ep.41: Single-Cell Sequencing Products 2023 Review_Part 2

Hi there!
Today is Part 2 of the review of single-cell-related products launched in 2023. I hope I don't miss any. If I do, send me a message telling me about it. 😉
Here are some useful links:
Exploring Single-Cell Sequencing online course
Companies that I talk during this episode (part 2):
Scale Biosciences
Scipio Bioscience
Singleron Biotechnologies
Takara Bio
10X Genomics
Free Resources
Sponsorship
Pay me a Ko-Fi
Thanks for listening!
Cheers,
Cátia

Ep. 40: Single-Cell Sequencing Products Review 2023_Part1

Hi there!
Today I review single-cell-related products launched in 2023. They are a lot! I hope I don't miss any. If I do, send me a message telling me about it. 😉
Here are some useful links:
Join the Single-Cell World Newsletter
Companies that I talk during this episode (part 1):
BD Biosciences 
Ep. 18: Samples Multiplexing
BioScryb Genomics
Fluent BioSciences
Episode 31: Podcast Fluent BioSciences
Honeycomb Biotechnologies
Episode 19: Podcast Honeycomb Biotechnologies
Mission Bio
Episode 16: Podcast Mission Bio
Parse Biosciences 
Episode 35: Podcast Parse Biosciences
Free Resources
Sponsorship
Pay me a Ko-Fi
Thanks for listening!
Cheers,
Cátia

Ep. 39: My Contribution to Frontline Genomics Spatial & Single-Cell Analysis Playbook

Hello there!
The Spatial and Single-Cell Analysis Playbook was released last week. Front Line Genomics produced it. I was honored to be invited to take part in it.
In this episode, you can hear the questions that were asked (AI voice here) and my responses during this fantastic interview.
I hope you like it!
Useful Links
Free Resources
The Single-Cell World website
Sponsorship
Pay me a Ko-Fi
Thanks for listening.Cheers,Cátia

Ep 38: QC’s that I Will Do Before A Spatial Transcriptomics Experiment

Hi there!
Would you like to know what quality control steps I think are essential before a spatial transcriptomics experiment? In my experience, these control steps can save you a lot of headaches.
Listen now, and tell me if you agree.
Useful Links
The Single-Cell World website
Sponsorship
Pay me a Ko-Fi
Thanks for listening.Cheers,Cátia

Ep.37: Exploring Single-Cell Spatial Transcriptomics with MERSCOPE®, Vizgen Technology

Discover the marvels of MERSCOPE®, a revolutionary platform that's reshaping the world of single-cell spatial transcriptomics. Think of it as Google Earth for genes; it allows us to directly map and quantify the spatial distribution of hundreds to tens of thousands of RNA species in individual cells. Dr. Jiang He, Vizgen’s Scientific Co-founder and Senior Director of Scientific Affairs explains everything about the MERSCOPE® technology! 
 
Listen now to learn more about single-cell spatial technology. And if you enjoy our podcast, don't forget to share with friends and subscribe to our podcast to listen to more groundbreaking discussions! 🚀🧬
 
Useful links:
Vizgen website
MERSCOPE Platform
Vizgen Twitter, LinkedIn, Youtube
Dr. Jiang He Twitter and LinkedIn
 
Support This Podcast
Sponsorship
Pay me a Ko-Fi
Thanks for listening.Cheers,Cátia