The Single-Cell World Podcast

Ep 38: QC’s that I Will Do Before A Spatial Transcriptomics Experiment

Hi there!
Would you like to know what quality control steps I think are essential before a spatial transcriptomics experiment? In my experience, these control steps can save you a lot of headaches.
Listen now, and tell me if you agree.
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Thanks for listening.Cheers,Cátia

Ep.37: Exploring Single-Cell Spatial Transcriptomics with MERSCOPE®, Vizgen Technology

Discover the marvels of MERSCOPE®, a revolutionary platform that's reshaping the world of single-cell spatial transcriptomics. Think of it as Google Earth for genes; it allows us to directly map and quantify the spatial distribution of hundreds to tens of thousands of RNA species in individual cells. Dr. Jiang He, Vizgen’s Scientific Co-founder and Senior Director of Scientific Affairs explains everything about the MERSCOPE® technology! 
 
Listen now to learn more about single-cell spatial technology. And if you enjoy our podcast, don't forget to share with friends and subscribe to our podcast to listen to more groundbreaking discussions! 🚀🧬
 
Useful links:
Vizgen website
MERSCOPE Platform
Vizgen Twitter, LinkedIn, Youtube
Dr. Jiang He Twitter and LinkedIn
 
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Sponsorship
Pay me a Ko-Fi
Thanks for listening.Cheers,Cátia

Ep. 36: Sample Preparation For Spatial Transcriptomics

Hi!Would you like to get a general idea about the sample preparation standard protocols for spatial transcriptomics experiments?Listen now 😉.Useful links:
Youtube Videos
Frozen Tissues Preparation
FFPE Tissues Preparation
How to Cut Your Frozen Tissue Sample To Get Beautiful Sections?
OCT Blocks Prep
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Thank you so much for listening.
Cheers,Cátia

Ep. 35: Parse Biosciences Evercode Technology: High-throughput single cell with combinatorial barcoding

Welcome to this episode, in which I have a fascinating conversation with Charles Roco, the founder and CTO of Parse Biosciences. In our conversation, Charlie talks about Evercode single-cell technology. We look into the amazing flexibility of this technology, which allows us to go beyond the limits of gene expression analysis.Join us as we examine this intriguing high-throughput technology that 96-well plates allow for.Parse Biosciences useful links:WebsiteResources: application notes, whitepapers, data sets,etcetera..LinkedInTwitterInstagramCharles Roco LinkedIn and TwitterSupport this podcast by buying me a coffee!Single-Cell World WebsiteThanks for listening!Have a lovely day,Cátia

Ep. 34: Samples For Spatial Transcriptomics

Hi tere,Do you know that besides solid tissues, we can use other types of samples for Spatial Trancriptomics?Listen now to this episode podcast to know about all the sample types that can be used.Useful links:Support this podcast by buying me a coffee!Single-Cell World WebsiteThanks for listening!Have a lovely day,Cátia

Ep. 33: PacBio’ MAS-Seq: Long-Read Sequencing For Single-Cell

In this episode, Dr. Elizabeth Tseng, associate director product manager at PacBio, explains everything about the MAS-Seq kit, a game-changer for producing long-read libraries. With the backing of single-cell industry giant 10X Genomics, the MAS-Seq kit promises to redefine the future of single-cell RNA seq assays.Whether you're a scientist or just curious about the future of single-cell research, this episode is your guide to the cutting-edge advancements in the field. Tune in to learn, explore, and be amazed! Some interesting links:Dr. Elizabeth Tseng, Social Media: X and LinkdeInPacBio Resources:WebsitePacBio Single-Cell RNA sequencingMAS-seq ProtocolMAS-seq Original PaperWebinarsUsefull LinksSupport this podcastJoin Our NewsletterNew WebsiteThanks for listening!Cheers,Cátia

Ep 32. Spatial Transcriptomics: Image-based methods (Live Instagram)

Hi! This is our first live episode on Instagram: Spatial Trancriptomics Image-Based Methods🎙️In this live, I talk about the different methods that are in the base of some of the Spatial Transcriptomics technology. Listen now!Usefull LinksSupport this podcastJoin Our NewsletterNew WebsiteThanks for listening!Cheers,Cátia

Ep. 31: PIPseq, scRNAseq using a vortex

Hi there,In this episode, I talk with Kristina Fontanez, PhD, co-founder and Senior Vice president of Product Development at Fluent Biosciences. We talk about the groundbreaking PIPseq single cell technology.Step into the fascinating world of single-cell RNA sequencing as Kristina demystifies the revolutionary PIPseq method that is making waves in single-cell research.What makes PIPseq stand out? Tune in now!Fluent Biosciences useful links:WebsiteResources: application notes, whitepapers, data sets, etc..LinkedInTwitterKristina Fontanez LinkedInSupport this podcast by buying me a coffee!Single-Cell World WebsiteThanks for listening!Have a lovely day,Cátia